Reactome · JSON-LD Context

Reactome Context

JSON-LD context defining the semantic vocabulary for Reactome from Reactome.

0 Classes 94 Properties 4 Namespaces
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Namespaces

reactome: https://reactome.org/schema/
bioschemas: https://bioschemas.org/
schema: https://schema.org/
xsd: http://www.w3.org/2001/XMLSchema#

Properties

Property Type Container
stId string
dbId integer
displayName string
className string
speciesName string
isInferred boolean
isInDisease boolean
releaseDate string
Pathway
Reaction
PhysicalEntity
Complex
Protein
Gene
AnalysisResult
AnalysisSummary
token string
pValue double
fdr double
found
total integer
identifier
url reference
name
description
ComponentOf
CrossReferenceResult
CustomInteraction
CustomPsicquicResource
DatabaseObject
DiagramOccurrencesResult
DiagramResult
Entry
EventProjection
FacetContainer
FacetList
FacetMapping
FireworksOccurrencesResult
FireworksResult
GroupedResult
IconPhysicalEntity
Interactor
InteractorEntity
Interactors
PageMapStringCollectionCrossReferenceResult
PageableObject
Participant
ParticipantRefEntities
PathwayBrowserNode
PsicquicResource
Result
SchemaCreator
SchemaDataCatalog
SchemaDataDownload
SchemaDataSet
SchemaNode
ShortCrossReference
SimpleDatabaseObject
SimpleEventProjection
SimpleReferenceObject
Sort
Summary
TargetResult
TupleResult
Bin
EntityStatistics
ExpressionSummary
ExternalAnalysisReaction
ExternalAnalysisResult
ExternalAnalysisSummary
ExternalExpressionSummary
ExternalIdentifier
ExternalInteraction
ExternalInteractor
ExternalMainIdentifier
ExternalPathwayNodeData
ExternalPathwayNodeSummary
ExternalSpeciesNode
ExternalStatistics
FoundElements
FoundEntities
FoundEntity
FoundInteractor
FoundInteractors
IdentifierMap
IdentifierSummary
MappedEntity
MappedIdentifier
PathwayBase
PathwaySummary
ReactionStatistics
ResourceSummary
SpeciesFilteredResult
SpeciesSummary

JSON-LD Document

Raw ↑
{
  "@context": {
    "@vocab": "https://reactome.org/schema/",
    "reactome": "https://reactome.org/schema/",
    "bioschemas": "https://bioschemas.org/",
    "schema": "https://schema.org/",
    "xsd": "http://www.w3.org/2001/XMLSchema#",
    "stId": {
      "@id": "reactome:stableId",
      "@type": "xsd:string"
    },
    "dbId": {
      "@id": "reactome:databaseId",
      "@type": "xsd:integer"
    },
    "displayName": {
      "@id": "schema:name",
      "@type": "xsd:string"
    },
    "className": {
      "@id": "reactome:className",
      "@type": "xsd:string"
    },
    "speciesName": {
      "@id": "reactome:speciesName",
      "@type": "xsd:string"
    },
    "isInferred": {
      "@id": "reactome:isInferred",
      "@type": "xsd:boolean"
    },
    "isInDisease": {
      "@id": "reactome:isInDisease",
      "@type": "xsd:boolean"
    },
    "releaseDate": {
      "@id": "schema:datePublished",
      "@type": "xsd:string"
    },
    "Pathway": {
      "@id": "bioschemas:Pathway"
    },
    "Reaction": {
      "@id": "reactome:Reaction"
    },
    "PhysicalEntity": {
      "@id": "reactome:PhysicalEntity"
    },
    "Complex": {
      "@id": "reactome:Complex"
    },
    "Protein": {
      "@id": "bioschemas:Protein"
    },
    "Gene": {
      "@id": "bioschemas:Gene"
    },
    "AnalysisResult": {
      "@id": "reactome:AnalysisResult"
    },
    "AnalysisSummary": {
      "@id": "reactome:AnalysisSummary"
    },
    "token": {
      "@id": "reactome:analysisToken",
      "@type": "xsd:string"
    },
    "pValue": {
      "@id": "reactome:pValue",
      "@type": "xsd:double"
    },
    "fdr": {
      "@id": "reactome:falseDiscoveryRate",
      "@type": "xsd:double"
    },
    "found": {
      "@id": "reactome:foundEntities"
    },
    "total": {
      "@id": "reactome:totalEntities",
      "@type": "xsd:integer"
    },
    "identifier": {
      "@id": "schema:identifier"
    },
    "url": {
      "@id": "schema:url",
      "@type": "@id"
    },
    "name": {
      "@id": "schema:name"
    },
    "description": {
      "@id": "schema:description"
    },
    "ComponentOf": {
      "@id": "reactome:ComponentOf"
    },
    "CrossReferenceResult": {
      "@id": "reactome:CrossReferenceResult"
    },
    "CustomInteraction": {
      "@id": "reactome:CustomInteraction"
    },
    "CustomPsicquicResource": {
      "@id": "reactome:CustomPsicquicResource"
    },
    "DatabaseObject": {
      "@id": "reactome:DatabaseObject"
    },
    "DiagramOccurrencesResult": {
      "@id": "reactome:DiagramOccurrencesResult"
    },
    "DiagramResult": {
      "@id": "reactome:DiagramResult"
    },
    "Entry": {
      "@id": "reactome:Entry"
    },
    "EventProjection": {
      "@id": "reactome:EventProjection"
    },
    "FacetContainer": {
      "@id": "reactome:FacetContainer"
    },
    "FacetList": {
      "@id": "reactome:FacetList"
    },
    "FacetMapping": {
      "@id": "reactome:FacetMapping"
    },
    "FireworksOccurrencesResult": {
      "@id": "reactome:FireworksOccurrencesResult"
    },
    "FireworksResult": {
      "@id": "reactome:FireworksResult"
    },
    "GroupedResult": {
      "@id": "reactome:GroupedResult"
    },
    "IconPhysicalEntity": {
      "@id": "reactome:IconPhysicalEntity"
    },
    "Interactor": {
      "@id": "reactome:Interactor"
    },
    "InteractorEntity": {
      "@id": "reactome:InteractorEntity"
    },
    "Interactors": {
      "@id": "reactome:Interactors"
    },
    "PageMapStringCollectionCrossReferenceResult": {
      "@id": "reactome:PageMapStringCollectionCrossReferenceResult"
    },
    "PageableObject": {
      "@id": "reactome:PageableObject"
    },
    "Participant": {
      "@id": "reactome:Participant"
    },
    "ParticipantRefEntities": {
      "@id": "reactome:ParticipantRefEntities"
    },
    "PathwayBrowserNode": {
      "@id": "reactome:PathwayBrowserNode"
    },
    "PsicquicResource": {
      "@id": "reactome:PsicquicResource"
    },
    "Result": {
      "@id": "reactome:Result"
    },
    "SchemaCreator": {
      "@id": "reactome:SchemaCreator"
    },
    "SchemaDataCatalog": {
      "@id": "reactome:SchemaDataCatalog"
    },
    "SchemaDataDownload": {
      "@id": "reactome:SchemaDataDownload"
    },
    "SchemaDataSet": {
      "@id": "reactome:SchemaDataSet"
    },
    "SchemaNode": {
      "@id": "reactome:SchemaNode"
    },
    "ShortCrossReference": {
      "@id": "reactome:ShortCrossReference"
    },
    "SimpleDatabaseObject": {
      "@id": "reactome:SimpleDatabaseObject"
    },
    "SimpleEventProjection": {
      "@id": "reactome:SimpleEventProjection"
    },
    "SimpleReferenceObject": {
      "@id": "reactome:SimpleReferenceObject"
    },
    "Sort": {
      "@id": "reactome:Sort"
    },
    "Summary": {
      "@id": "reactome:Summary"
    },
    "TargetResult": {
      "@id": "reactome:TargetResult"
    },
    "TupleResult": {
      "@id": "reactome:TupleResult"
    },
    "Bin": {
      "@id": "reactome:Bin"
    },
    "EntityStatistics": {
      "@id": "reactome:EntityStatistics"
    },
    "ExpressionSummary": {
      "@id": "reactome:ExpressionSummary"
    },
    "ExternalAnalysisReaction": {
      "@id": "reactome:ExternalAnalysisReaction"
    },
    "ExternalAnalysisResult": {
      "@id": "reactome:ExternalAnalysisResult"
    },
    "ExternalAnalysisSummary": {
      "@id": "reactome:ExternalAnalysisSummary"
    },
    "ExternalExpressionSummary": {
      "@id": "reactome:ExternalExpressionSummary"
    },
    "ExternalIdentifier": {
      "@id": "reactome:ExternalIdentifier"
    },
    "ExternalInteraction": {
      "@id": "reactome:ExternalInteraction"
    },
    "ExternalInteractor": {
      "@id": "reactome:ExternalInteractor"
    },
    "ExternalMainIdentifier": {
      "@id": "reactome:ExternalMainIdentifier"
    },
    "ExternalPathwayNodeData": {
      "@id": "reactome:ExternalPathwayNodeData"
    },
    "ExternalPathwayNodeSummary": {
      "@id": "reactome:ExternalPathwayNodeSummary"
    },
    "ExternalSpeciesNode": {
      "@id": "reactome:ExternalSpeciesNode"
    },
    "ExternalStatistics": {
      "@id": "reactome:ExternalStatistics"
    },
    "FoundElements": {
      "@id": "reactome:FoundElements"
    },
    "FoundEntities": {
      "@id": "reactome:FoundEntities"
    },
    "FoundEntity": {
      "@id": "reactome:FoundEntity"
    },
    "FoundInteractor": {
      "@id": "reactome:FoundInteractor"
    },
    "FoundInteractors": {
      "@id": "reactome:FoundInteractors"
    },
    "IdentifierMap": {
      "@id": "reactome:IdentifierMap"
    },
    "IdentifierSummary": {
      "@id": "reactome:IdentifierSummary"
    },
    "MappedEntity": {
      "@id": "reactome:MappedEntity"
    },
    "MappedIdentifier": {
      "@id": "reactome:MappedIdentifier"
    },
    "PathwayBase": {
      "@id": "reactome:PathwayBase"
    },
    "PathwaySummary": {
      "@id": "reactome:PathwaySummary"
    },
    "ReactionStatistics": {
      "@id": "reactome:ReactionStatistics"
    },
    "ResourceSummary": {
      "@id": "reactome:ResourceSummary"
    },
    "SpeciesFilteredResult": {
      "@id": "reactome:SpeciesFilteredResult"
    },
    "SpeciesSummary": {
      "@id": "reactome:SpeciesSummary"
    }
  }
}